2ZL1 Protein Binding date Apr 02, 2008
title Mp1-P14 Scaffolding Complex
authors J.D.Schrag, M.Cygler, C.Munger, A.Magloire
compound source
Molecule: Mitogen-Activated Protein Kinase Kinase 1-Interac Protein 1;
Chain: A
Synonym: Mek-Binding Partner 1, Mp1
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Gene: Map2k1ip1
Expression_system: Escherichia Coli
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Petduet

Molecule: Mitogen-Activated Protein-Binding Protein-Interac Protein;
Chain: B
Synonym: Late Endosomallysosomal Mp1-Interacting Protein,
Engineered: Yes

Organism_scientific: Mus Musculus
Organism_common: Mouse
Gene: Mapbpip
Expression_system: Escherichia Coli
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Petduet
symmetry Space Group: P 21 21 21
R_factor 0.203 R_Free 0.256
crystal
cell
length a length b length c angle alpha angle beta angle gamma
44.290 62.440 74.980 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceMolecular dynamics-solvated interaction energy studies of protein-protein interactions: the MP1-p14 scaffolding complex., Cui Q, Sulea T, Schrag JD, Munger C, Hung MN, Naim M, Cygler M, Purisima EO, J Mol Biol. 2008 Jun 13;379(4):787-802. Epub 2008 Apr 20. PMID:18479705
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (43 Kb) [Save to disk]
  • Biological Unit Coordinates (2zl1.pdb1.gz) 38 Kb
  • CSU: Contacts of Structural Units for 2ZL1
  • Likely Quarternary Molecular Structure file(s) for 2ZL1
  • Structure Factors (102 Kb)
  • Retrieve 2ZL1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2ZL1 from S2C, [Save to disk]
  • Re-refined 2zl1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2ZL1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2ZL1
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2ZL1, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2zl1_A] [2zl1_B] [2zl1]
  • SWISS-PROT database: [Q9JHS3] [Q9UHA4]
  • Domain organization of [MAPIP_MOUSE] [MPKS1_HUMAN] by SWISSPFAM
  • Domains found in 2ZL1: [MAPKK1_Int] [Robl_LC7 ] by SMART
  • Other resources with information on 2ZL1
  • Community annotation for 2ZL1 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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