2QKR Transferase date Jul 11, 2007
title Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 Wit Indirubin 3'-Monoxime Bound
authors A.K.Wernimont, A.Dong, J.Lew, Y.H.Lin, A.Hassanali, C.H.Arrowsmit A.M.Edwards, J.Weigelt, M.Sundstrom, A.Bochkarev, R.Hui, J.D.Art Structural Genomics Consortium (Sgc)
compound source
Molecule: Cdc2-Like Cdk2cdc28 Like Protein Kinase
Chain: A
Ec: 2.7.11.22
Engineered: Yes
Organism_scientific: Cryptosporidium Parvum Iowa II
Organism_taxid: 353152
Strain: Iowa Type II
Gene: Cgd5_2510
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Dh5a
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P15-Mhl-Lic
symmetry Space Group: P 43 21 2
R_factor 0.247 R_Free 0.300
crystal
cell
length a length b length c angle alpha angle beta angle gamma
64.133 64.133 201.153 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.60 Å
ligand IXM enzyme Transferase E.C.2.7.11.22 BRENDA
Gene CGD5
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (50 Kb) [Save to disk]
  • Biological Unit Coordinates (2qkr.pdb1.gz) 44 Kb
  • LPC: Ligand-Protein Contacts for 2QKR
  • CSU: Contacts of Structural Units for 2QKR
  • Likely Quarternary Molecular Structure file(s) for 2QKR
  • Structure Factors (99 Kb)
  • Retrieve 2QKR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2QKR from S2C, [Save to disk]
  • Re-refined 2qkr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2QKR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2QKR
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2QKR, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2qkr_A] [2qkr]
  • SWISS-PROT database: [Q5CRJ8]
  • Domain organization of [Q5CRJ8_CRYPV] by SWISSPFAM
  • Domain found in 2QKR: [S_TKc ] by SMART
  • Other resources with information on 2QKR
  • Community annotation for 2QKR at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science