398D		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
Primary reference	Crystal structure of an eight-base pair duplex containing the 3'-DNA-RNA-5' junction formed during initiation of minus-strand synthesis of HIV replication., Mueller U, Maier G, Mochi Onori A, Cellai L, Heumann H, Heinemann U, Biochemistry 1998 Sep 1;37(35):12005-11. PMID:9724510

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (18 Kb) [Save to disk] Biological Unit Coordinates (398d.pdb1.gz) 8 Kb Biological Unit Coordinates (398d.pdb2.gz) 8 Kb CSU: Contacts of Structural Units for 398D Likely Quarternary Molecular Structure file(s) for 398D Structure Factors (52 Kb) Retrieve 398D in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 398D from S2C, [Save to disk] Re-refined 398d structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 398D in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [398d] [398d_A] [398d_B] [398d_C] [398d_D] SWISS-PROT database:

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