3A8Y	Hydrolase	date	Oct 13, 2009
title	Crystal Structure Of The Complex Between The Bag5 Bd5 And Hs
authors	A.Arakawa, N.Handa, N.Ohsawa, M.Shirouzu, S.Yokoyama, Riken Struc Genomicsproteomics Initiative (Rsgi)
compound		source
Molecule: Heat Shock 70 Kda Protein 1 Chain: A, B Fragment: Nucleotide-Binding Domain, Unp Residues 1-388 Synonym: Hsp70.1, Hsp70-1hsp70-2 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Hsp70 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Rosetta2 (De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet32
Molecule: Bag Family Molecular Chaperone Regulator 5 Chain: C, D Fragment: Bag Domain 5, Unp Residues 341-447 Synonym: Bag-5, Bcl-2-Associated Athanogene 5 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Bag5 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Krx Expression_system_vector_type: Plasmid Expression_system_plasmid: Pcr2.1
symmetry	Space Group: P 1 21 1	R_factor 0.218 R_Free 0.281
crystal cell	length a length b length c angle alpha angle beta angle gamma 64.108 84.266 96.632 90.00 100.73 90.00
method	X-Ray Diffraction	resolution	2.30 Å
ligand	TRS	enzyme
Gene Ontology	Chain Function Process Component D, C
Primary reference	The C-terminal BAG domain of BAG5 induces conformational changes of the Hsp70 nucleotide-binding domain for ADP-ATP exchange., Arakawa A, Handa N, Ohsawa N, Shida M, Kigawa T, Hayashi F, Shirouzu M, Yokoyama S, Structure. 2010 Mar 10;18(3):309-19. PMID:20223214

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (165 Kb) [Save to disk] Biological Unit Coordinates (3a8y.pdb1.gz) 83 Kb Biological Unit Coordinates (3a8y.pdb2.gz) 80 Kb LPC: Ligand-Protein Contacts for 3A8Y CSU: Contacts of Structural Units for 3A8Y Structure Factors (1132 Kb) Retrieve 3A8Y in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3A8Y from S2C, [Save to disk] Re-refined 3a8y structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3A8Y in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3A8Y

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3A8Y, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3a8y_D] [3a8y_C] [3a8y] [3a8y_A] [3a8y_B] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3A8Y: [BAG ] by SMART

Other resources with information on 3A8Y

Community annotation for 3A8Y at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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