3AA7 Protein Binding date Nov 11, 2009
title Crystal Structure Of Actin Capping Protein
authors S.Takeda, S.Minakata, A.Narita, M.Kitazawa, T.Yamakuni, Y.Maeda, Y
compound source
Molecule: F-Actin-Capping Protein Subunit Alpha-1
Chain: A
Synonym: Capz 3632, Beta-Actinin Subunit I
Engineered: Yes
Organism_scientific: Gallus Gallus
Organism_common: Chicken
Organism_taxid: 9031
Gene: Capza1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Rosetta2 (De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Petduet1

Molecule: F-Actin-Capping Protein Subunit Beta Isoforms 1 A
Chain: B
Synonym: Capz B1 And B2, Capz 3632, Beta-Actinin Subunit I
Engineered: Yes
Mutation: Yes
Other_details: Beta Tentacle Deletion

Organism_scientific: Gallus Gallus
Organism_common: Chicken
Organism_taxid: 9031
Gene: Capzb
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Rosetta2 (De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Petduet1
symmetry Space Group: P 21 21 21
R_factor 0.209 R_Free 0.261
crystal
cell
length a length b length c angle alpha angle beta angle gamma
53.913 68.680 130.086 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand BA, MES enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceTwo distinct mechanisms for actin capping protein regulation--steric and allosteric inhibition., Takeda S, Minakata S, Koike R, Kawahata I, Narita A, Kitazawa M, Ota M, Yamakuni T, Maeda Y, Nitanai Y, PLoS Biol. 2010 Jul 6;8(7):e1000416. PMID:20625546
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (93 Kb) [Save to disk]
  • Biological Unit Coordinates (3aa7.pdb1.gz) 88 Kb
  • LPC: Ligand-Protein Contacts for 3AA7
  • CSU: Contacts of Structural Units for 3AA7
  • Structure Factors (557 Kb)
  • Retrieve 3AA7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3AA7 from S2C, [Save to disk]
  • Re-refined 3aa7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3AA7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3AA7
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3AA7, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3aa7] [3aa7_B] [3aa7_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3AA7
  • Community annotation for 3AA7 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science