3ABL		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	CDL, CHD, CU, CUA, DMU, FME, HEA, MG, NA, PEK, PER, PGV, PSC, TGL, TPO, UNX, ZN	enzyme
Gene Ontology	Chain Function Process Component A, N F, S G, T H, U I, V cytochrome-c oxidase activit... J, W K, X L, Y O, B cytochrome-c oxidase activit... P, C cytochrome-c oxidase activit... oxidoreduction-driven active... Q, D R, E Z, M
Primary reference	A peroxide bridge between Fe and Cu ions in the O2 reduction site of fully oxidized cytochrome c oxidase could suppress the proton pump., Aoyama H, Muramoto K, Shinzawa-Itoh K, Hirata K, Yamashita E, Tsukihara T, Ogura T, Yoshikawa S, Proc Natl Acad Sci U S A. 2009 Feb 17;106(7):2165-9. Epub 2009 Jan 21. PMID:19164527

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (666 Kb) [Save to disk] Biological Unit Coordinates (3abl.pdb1.gz) 328 Kb Biological Unit Coordinates (3abl.pdb2.gz) 325 Kb LPC: Ligand-Protein Contacts for 3ABL CSU: Contacts of Structural Units for 3ABL Structure Factors (3179 Kb) Retrieve 3ABL in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3ABL from S2C, [Save to disk] Re-refined 3abl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3ABL in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3abl] [3abl_A] [3abl_B] [3abl_C] [3abl_D] [3abl_E] [3abl_F] [3abl_G] [3abl_H] [3abl_I] [3abl_J] [3abl_K] [3abl_L] [3abl_M] [3abl_N] [3abl_O] [3abl_P] [3abl_Q] [3abl_R] [3abl_S] [3abl_T] [3abl_U] [3abl_V] [3abl_W] [3abl_X] [3abl_Y] [3abl_Z] SWISS-PROT database: [P00396] [P68530] [P00415] [P00423] [P00426] [P00428] [P04038] [P13183] [P00430] [P10175] [P07471] [P00429] [P07470] Belongs to the proton-translocating cytochrome oxidase (cox) superfamily according to TCDB.

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