3ABV	Oxidoreductase Oxidoreductase Inhibitor	date	Dec 22, 2009
title	Crystal Structure Of Porcine Heart Mitochondrial Complex II N-Biphenyl-3-Yl-2-Trifluoromethyl-Benzamide
authors	S.Harada, T.Sasaki, M.Shindo, Y.Kido, D.K.Inaoka, J.Omori, A.Osana K.Sakamoto, J.Mao, S.Matsuoka, M.Inoue, T.Honma, A.Tanaka, K.Kita
compound		source
Molecule: Succinate Dehydrogenase [Ubiquinone] Flavoprotein Mitochondrial; Chain: A Synonym: Flavoprotein Subunit Of Complex II, Fp Ec: 1.3.5.1		Organism_scientific: Sus Scrofa Organism_common: Pig Organism_taxid: 9823 Organ: Heart Tissue: Muscle
Molecule: Succinate Dehydrogenase [Ubiquinone] Iron-Sulfur Mitochondrial; Chain: B Synonym: Iron-Sulfur Subunit Of Complex II, Ip Ec: 1.3.5.1		Organism_scientific: Sus Scrofa Organism_common: Pig Organism_taxid: 9823 Organ: Heart Tissue: Muscle
Molecule: Succinate Dehydrogenase Cytochrome B560 Subunit, Mitochondrial; Chain: C Synonym: Succinate-Ubiquinone Oxidoreductase Cytochrome B L Subunit, Cybl;		Organism_scientific: Sus Scrofa Organism_common: Pig Organism_taxid: 9823 Organ: Heart Tissue: Muscle
Molecule: Succinate Dehydrogenase [Ubiquinone] Cytochrome B Subunit, Mitochondrial; Chain: D Fragment: Residues 57-159 Synonym: Succinate-Ubiquinone Oxidoreductase Cytochrome B S Subunit, Cybs, Succinate-Ubiquinone Reductase Membrane Anch Subunit, Qps3, Cii-4, Succinate Dehydrogenase Complex Subun		Organism_scientific: Sus Scrofa Organism_common: Pig Organism_taxid: 9823 Organ: Heart Tissue: Muscle
symmetry	Space Group: P 21 21 21	R_factor 0.203 R_Free 0.253
crystal cell	length a length b length c angle alpha angle beta angle gamma 71.702 84.170 294.432 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	3.24 Å
ligand	EPH, F3S, F6A, FAD, FES, HEM, MLI, SF4	enzyme	Oxidoreductase E.C.1.3.5.1 BRENDA
Gene Ontology	Chain Function Process Component A mitochondrial respiratory ch... B electron transfer activity C D
Primary reference	Structural Insights into the Molecular Design of Flutolanil Derivatives Targeted for Fumarate Respiration of Parasite Mitochondria., Inaoka DK, Shiba T, Sato D, Balogun EO, Sasaki T, Nagahama M, Oda M, Matsuoka S, Ohmori J, Honma T, Inoue M, Kita K, Harada S, Int J Mol Sci. 2015 Jul 7;16(7):15287-308. doi: 10.3390/ijms160715287. PMID:26198225

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (376 Kb) [Save to disk] Biological Unit Coordinates (3abv.pdb1.gz) 364 Kb LPC: Ligand-Protein Contacts for 3ABV CSU: Contacts of Structural Units for 3ABV Structure Factors (440 Kb) Retrieve 3ABV in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3ABV from S2C, [Save to disk] Re-refined 3abv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3ABV in 3D

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Visual 3D analysis of 3ABV

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3ABV, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3abv_C] [3abv_A] [3abv_B] [3abv_D] [3abv] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3ABV

Community annotation for 3ABV at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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