3AFG		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	CA	enzyme
Gene Ontology	Chain Function Process Component B, A
Primary reference	Crystal structure of a subtilisin homologue, Tk-SP, from Thermococcus kodakaraensis: requirement of a C-terminal beta-jelly roll domain for hyperstability., Foophow T, Tanaka S, Angkawidjaja C, Koga Y, Takano K, Kanaya S, J Mol Biol. 2010 Jul 23;400(4):865-77. Epub 2010 Jun 1. PMID:20595040

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (168 Kb) [Save to disk] Biological Unit Coordinates (3afg.pdb1.gz) 83 Kb Biological Unit Coordinates (3afg.pdb2.gz) 82 Kb LPC: Ligand-Protein Contacts for 3AFG CSU: Contacts of Structural Units for 3AFG Structure Factors (1138 Kb) Retrieve 3AFG in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3AFG from S2C, [Save to disk] Re-refined 3afg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3AFG in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3afg] [3afg_A] [3afg_B] SWISS-PROT database:

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---