3AG4 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CDL, CHD, CU, CUA, CYN, DMU, FME, HEA, MG, NA, PEK, PGV, PSC, SAC, TGL, TPO, UNX, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, O
  • cytochrome-c oxidase activit...


    • C, P
  • cytochrome-c oxidase activit...
  • oxidoreduction-driven active...


    • D, Q


    E, R


    F, S


    K, X


    L, Y


    M, Z


    N, A


    T, G


    U, H


    V, I
  • cytochrome-c oxidase activit...


    • W, J


    Primary referenceBovine cytochrome c oxidase structures enable O2 reduction with minimization of reactive oxygens and provide a proton-pumping gate., Muramoto K, Ohta K, Shinzawa-Itoh K, Kanda K, Taniguchi M, Nabekura H, Yamashita E, Tsukihara T, Yoshikawa S, Proc Natl Acad Sci U S A. 2010 Apr 12. PMID:20385840
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (668 Kb) [Save to disk]
  • Biological Unit Coordinates (3ag4.pdb1.gz) 330 Kb
  • Biological Unit Coordinates (3ag4.pdb2.gz) 326 Kb
  • LPC: Ligand-Protein Contacts for 3AG4
  • CSU: Contacts of Structural Units for 3AG4
  • Structure Factors (3284 Kb)
  • Retrieve 3AG4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3AG4 from S2C, [Save to disk]
  • Re-refined 3ag4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3AG4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ag4] [3ag4_A] [3ag4_B] [3ag4_C] [3ag4_D] [3ag4_E] [3ag4_F] [3ag4_G] [3ag4_H] [3ag4_I] [3ag4_J] [3ag4_K] [3ag4_L] [3ag4_M] [3ag4_N] [3ag4_O] [3ag4_P] [3ag4_Q] [3ag4_R] [3ag4_S] [3ag4_T] [3ag4_U] [3ag4_V] [3ag4_W] [3ag4_X] [3ag4_Y] [3ag4_Z]
  • SWISS-PROT database:

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