3ANR Transferase Transferase Inhibitor date Sep 06, 2010
title Human Dyrk1aharmine Complex
authors Y.Nonaka, T.Hosoya, M.Hagiwara, N.Ito
compound source
Molecule: Dual Specificity Tyrosine-Phosphorylation-Regulat 1a;
Chain: A, B, C, D
Fragment: Unp Residues 126-490
Synonym: Protein Kinase Minibrain Homolog, Mnbh, Hmnb, Hp86 Specificity Yak1-Related Kinase;
Ec: 2.7.12.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Dyrk1a, Dyrk, Mnb, Mnbh
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
symmetry Space Group: P 21 21 21
R_factor 0.232 R_Free 0.264
crystal
cell
length a length b length c angle alpha angle beta angle gamma
87.578 88.142 227.139 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.60 Å
ligand HRM, PTR enzyme Transferase E.C.2.7.12.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceDevelopment of a novel selective inhibitor of the Down syndrome-related kinase Dyrk1A., Ogawa Y, Nonaka Y, Goto T, Ohnishi E, Hiramatsu T, Kii I, Yoshida M, Ikura T, Onogi H, Shibuya H, Hosoya T, Ito N, Hagiwara M, Nat Commun. 2010 Oct;1(7):1-9. PMID:20981014
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (233 Kb) [Save to disk]
  • Biological Unit Coordinates (3anr.pdb1.gz) 59 Kb
  • Biological Unit Coordinates (3anr.pdb2.gz) 60 Kb
  • Biological Unit Coordinates (3anr.pdb3.gz) 59 Kb
  • Biological Unit Coordinates (3anr.pdb4.gz) 60 Kb
  • LPC: Ligand-Protein Contacts for 3ANR
  • CSU: Contacts of Structural Units for 3ANR
  • Structure Factors (375 Kb)
  • Retrieve 3ANR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3ANR from S2C, [Save to disk]
  • Re-refined 3anr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3ANR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3ANR
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3ANR, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3anr_B] [3anr_C] [3anr_D] [3anr] [3anr_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3ANR: [S_TKc ] by SMART
  • Other resources with information on 3ANR
  • Community annotation for 3ANR at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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