3AXA date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Primary referenceCrystal structure of afadin PDZ domain-nectin-3 complex shows the structural plasticity of the ligand-binding site., Fujiwara Y, Goda N, Tamashiro T, Narita H, Satomura K, Tenno T, Nakagawa A, Oda M, Suzuki M, Sakisaka T, Takai Y, Hiroaki H, Protein Sci. 2015 Mar;24(3):376-85. doi: 10.1002/pro.2628. Epub 2015 Jan 13. PMID:25534554
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (66 Kb) [Save to disk]
  • Biological Unit Coordinates (3axa.pdb1.gz) 61 Kb
  • Biological Unit Coordinates (3axa.pdb2.gz) 61 Kb
  • CSU: Contacts of Structural Units for 3AXA
  • Structure Factors (87 Kb)
  • Retrieve 3AXA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3AXA from S2C, [Save to disk]
  • Re-refined 3axa structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3AXA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3axa] [3axa_A] [3axa_B]
  • SWISS-PROT database:
  • Domain found in 3AXA: [PDZ ] by SMART

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