3AZJ	Crystal Structure of Human Nucleosome Core Particle Containing H4K44Q mutation	date
authors	Iwasaki, W., Tachiwana, H., Kawaguchi, K., Shibata, T., Kagawa, W., Kurumizaka, H.
compound		source
symmetry		R_factor R_Free 0.268
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	2.89
ligand	CL, MN	enzyme
Gene Ontology	Chain Function Process Component A, E C, G F, B H, D
Primary reference	Comprehensive Structural Analysis of Mutant Nucleosomes Containing Lysine to Glutamine (KQ) Substitutions in the H3 and H4 Histone-Fold Domains., Iwasaki W, Tachiwana H, Kawaguchi K, Shibata T, Kagawa W, Kurumizaka H, Biochemistry. 2011 Sep 13;50(36):7822-32. Epub 2011 Aug 17. PMID:21812398

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (245 Kb) [Save to disk] Biological Unit Coordinates (3azj.pdb1.gz) 238 Kb LPC: Ligand-Protein Contacts for 3AZJ CSU: Contacts of Structural Units for 3AZJ Structure Factors (409 Kb) Retrieve 3AZJ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3AZJ from S2C, [Save to disk] Re-refined 3azj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3AZJ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3AZJ

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute 3D motif for 3AZJ, from MSDmotif at EBI Fold representative 3azj from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3azj_I] [3azj_C] [3azj_J] [3azj_G] [3azj_B] [3azj_D] [3azj_H] [3azj_E] [3azj_F] [3azj_A] [3azj] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 3AZJ: [H2A] [H2B] [H3] [H4 ] by SMART

Other resources with information on 3AZJ

Community annotation for 3AZJ at PDBWiki (http://pdbwiki.org)

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