3B29 Lyase date Jul 22, 2011
title Human Leukotriene C4 Synthase In Complex With Dodecyl-Beta-D Selenomaltoside
authors H.Saino, H.Ago, M.Miyano
compound source
Molecule: Leukotriene C4 Synthase
Chain: A
Synonym: Ltc4 Synthase, Leukotriene-C(4) Synthase
Ec: 4.4.1.20
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ltc4s
Expression_system: Schizosaccharomyces Pombe
Expression_system_common: Fission Yeast
Expression_system_taxid: 4896
symmetry Space Group: F 2 3
R_factor 0.203 R_Free 0.209
crystal
cell
length a length b length c angle alpha angle beta angle gamma
168.594 168.594 168.594 90.00 90.00 90.00
method X-Ray Diffractionresolution 3.20 Å
ligand GSH, LSM, SO4 enzyme Lyase E.C.4.4.1.20 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A
  • glutathione peroxidase activ...
  • enzyme activator activity


  • Primary referenceSeleno-detergent MAD phasing of leukotriene C4 synthase in complex with dodecyl-beta-D-selenomaltoside., Saino H, Ago H, Ukita Y, Miyano M, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2011 Dec 1;67(Pt 12):1666-73., Epub 2011 Nov 29. PMID:22139193
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (31 Kb) [Save to disk]
  • Biological Unit Coordinates (3b29.pdb1.gz) 70 Kb
  • LPC: Ligand-Protein Contacts for 3B29
  • CSU: Contacts of Structural Units for 3B29
  • Structure Factors (104 Kb)
  • Retrieve 3B29 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3B29 from S2C, [Save to disk]
  • Re-refined 3b29 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
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  • Visual 3D analysis of 3B29
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3B29, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3b29_A] [3b29]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3B29
  • Community annotation for 3B29 at PDBWiki (http://pdbwiki.org)
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