3B2D date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand BMA, MAN, NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A


D, C


Primary referenceCrystal Structures of Mouse and Human RP105/MD-1 Complexes Reveal Unique Dimer Organization of the Toll-Like Receptor Family., Ohto U, Miyake K, Shimizu T, J Mol Biol. 2011 Nov 4;413(4):815-25. Epub 2011 Sep 19. PMID:21959264
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (482 Kb) [Save to disk]
  • Biological Unit Coordinates (3b2d.pdb1.gz) 475 Kb
  • LPC: Ligand-Protein Contacts for 3B2D
  • CSU: Contacts of Structural Units for 3B2D
  • Structure Factors (586 Kb)
  • Retrieve 3B2D in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3B2D from S2C, [Save to disk]
  • Re-refined 3b2d structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3B2D in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3b2d] [3b2d_A] [3b2d_B] [3b2d_C] [3b2d_D]
  • SWISS-PROT database:
  • Domains found in 3B2D: [LRR] [LRRCT] [ML ] by SMART

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