3B7E Neuraminidase of A/Brevig Mission/1/1918 H1N1 strain in complex with zanamivir date
authors Xu, X., Zhu, X., Wilson, I.A.
compound source
symmetry
R_factor
R_Free 0.16015
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.45
ligand CA, FUC, GOL, NAG, ZMR BindingDB enzyme
note 3B7E (Molecule of the Month:pdb113)is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructural characterization of the 1918 influenza H1N1 neuraminidase., Xu X, Zhu X, Dwek RA, Stevens J, Wilson IA, J Virol. 2008 Aug 20. PMID:18715929
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (144 Kb) [Save to disk]
  • Biological Unit Coordinates (3b7e.pdb1.gz) 272 Kb
  • LPC: Ligand-Protein Contacts for 3B7E
  • CSU: Contacts of Structural Units for 3B7E
  • Likely Quarternary Molecular Structure file(s) for 3B7E
  • Structure Factors (1233 Kb)
  • Retrieve 3B7E in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3B7E from S2C, [Save to disk]
  • Re-refined 3b7e structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3B7E in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3B7E
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3B7E, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3b7e] [3b7e_B] [3b7e_A]
  • SWISS-PROT database: [Q9IGQ6]
  • Domain organization of [NRAM_I18A0] by SWISSPFAM
  • Other resources with information on 3B7E
  • Community annotation for 3B7E at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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