3BA8	Ligase	date	Nov 07, 2007
title	Structural Basis For The Inhibition Of Bacterial Nad+ Dependent Dna Ligase
authors	C.Pinko
compound		source
Molecule: Dna Ligase Chain: A Fragment: Adenylation Domain Ec: 6.5.1.2 Engineered: Yes		Organism_scientific: Enterococcus Faecalis Organism_common: Streptococcus Faecalis Organism_taxid: 1351 Gene: Liga Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: C 1 2 1	R_factor 0.193 R_Free 0.223
crystal cell	length a length b length c angle alpha angle beta angle gamma 90.496 86.285 56.609 90.00 100.94 90.00
method	X-Ray Diffraction	resolution	1.90 Å
ligand	3B8, NMN, SO4	enzyme	Ligase E.C.6.5.1.2 BRENDA
Gene Ontology	Chain Function Process Component A

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (62 Kb) [Save to disk] Biological Unit Coordinates (3ba8.pdb1.gz) 58 Kb LPC: Ligand-Protein Contacts for 3BA8 CSU: Contacts of Structural Units for 3BA8 Likely Quarternary Molecular Structure file(s) for 3BA8 Retrieve 3BA8 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3BA8 from S2C, [Save to disk]

View 3BA8 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3BA8

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3BA8, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3ba8] [3ba8_A] SWISS-PROT database: [Q837V6] Domain organization of [DNLJ_ENTFA] by SWISSPFAM Domain found in 3BA8: [LIGANc ] by SMART

Other resources with information on 3BA8

Community annotation for 3BA8 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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