3BBB	Transferase	date	Nov 09, 2007
title	Crystal Structure Of The Nm23-H2 Transcription Factor Comple Dinucleotide D(Ag)
authors	A.Weichsel, W.R.Montfort
compound		source
Molecule: Nucleoside Diphosphate Kinase B Chain: A, B, C, D, E, F Synonym: Ndk B, Ndp Kinase B, Nm23-H2, C-Myc Purine-Binding Transcription Factor Puf; Ec: 2.7.4.6 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Nme2, Nm23b Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3)Plyss Expression_system_plasmid: Plasmid
symmetry	Space Group: P 21 21 21	R_factor 0.175 R_Free 0.220
crystal cell	length a length b length c angle alpha angle beta angle gamma 52.466 118.219 128.910 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.30 Å
ligand	DA, DG	enzyme	Transferase E.C.2.7.4.6 BRENDA
Gene Ontology	Chain Function Process Component F, A, D, C, E, B protein histidine kinase act...
Primary reference	NM23-H2 may play an indirect role in transcriptional activation of c-myc gene expression but does not cleave the nuclease hypersensitive element III1., Dexheimer TS, Carey SS, Zuohe S, Gokhale VM, Hu X, Murata LB, Maes EM, Weichsel A, Sun D, Meuillet EJ, Montfort WR, Hurley LH, Mol Cancer Ther. 2009 May 12. PMID:19435876

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (320 Kb) [Save to disk] Biological Unit Coordinates (3bbb.pdb1.gz) 315 Kb LPC: Ligand-Protein Contacts for 3BBB CSU: Contacts of Structural Units for 3BBB Likely Quarternary Molecular Structure file(s) for 3BBB Structure Factors (2833 Kb) Retrieve 3BBB in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3BBB from S2C, [Save to disk] Re-refined 3bbb structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3BBB in 3D

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Visual 3D analysis of 3BBB

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3BBB, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3bbb_F] [3bbb] [3bbb_B] [3bbb_D] [3bbb_E] [3bbb_C] [3bbb_A] SWISS-PROT database: [P22392] Domain organization of [NDKB_HUMAN] by SWISSPFAM Domain found in 3BBB: [NDK ] by SMART

Other resources with information on 3BBB

Community annotation for 3BBB at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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