3BKB	Transferase	date	Dec 06, 2007
title	Crystal Structure Of Human Feline Sarcoma Viral Oncogene Hom Fes)
authors	P.Filippakopoulos, E.Salah, O.Fedorov, C.Cooper, E.Ugochukwu, A.C F.Von Delft, C.H.Arrowsmith, A.M.Edwards, J.Weigelt, S.Knapp, St Genomics Consortium (Sgc)
compound		source
Molecule: Proto-Oncogene Tyrosine-Protein Kinase Fesfps Chain: A Fragment: Residues 448-822 Synonym: C-Fes Ec: 2.7.10.2 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Fes, Fps Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3)(R3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pnic28-Bsa4
symmetry	Space Group: P 63	R_factor 0.148 R_Free 0.189
crystal cell	length a length b length c angle alpha angle beta angle gamma 80.404 80.404 131.411 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	1.78 Å
ligand	EDO, SO4, STU BindingDB	enzyme	Transferase E.C.2.7.10.2 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Structural coupling of SH2-kinase domains links Fes and Abl substrate recognition and kinase activation., Filippakopoulos P, Kofler M, Hantschel O, Gish GD, Grebien F, Salah E, Neudecker P, Kay LE, Turk BE, Superti-Furga G, Pawson T, Knapp S, Cell. 2008 Sep 5;134(5):793-803. PMID:18775312

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (75 Kb) [Save to disk] Biological Unit Coordinates (3bkb.pdb1.gz) 69 Kb LPC: Ligand-Protein Contacts for 3BKB CSU: Contacts of Structural Units for 3BKB Likely Quarternary Molecular Structure file(s) for 3BKB Structure Factors (2407 Kb) Retrieve 3BKB in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3BKB from S2C, [Save to disk] Re-refined 3bkb structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3BKB in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3BKB

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3BKB, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3bkb_A] [3bkb] SWISS-PROT database: [P07332] Domain organization of [FES_HUMAN] by SWISSPFAM Domains found in 3BKB: [SH2] [TyrKc ] by SMART

Other resources with information on 3BKB

Community annotation for 3BKB at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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