3BMY	Chaperone	date	Dec 13, 2007
title	Discovery Of Benzisoxazoles As Potent Inhibitors Of Chaperon
authors	A.Gopalsamy, M.Shi, E.M.Vogan, J.Golas, J.Jacob, J.Johnson, F.Lee, R.Nilakantan, R.Peterson, K.Svenson, M.S.Tam, Y.Wen, R.Chopra, J.Ellingboe, K.Arndt, F.Boschelli
compound		source
Molecule: Heat Shock Protein Hsp 90-Alpha Chain: A Fragment: N-Terminal Domain, Unp Residues 10-236 Synonym: Hsp 86, Renal Carcinoma Antigen Ny-Ren-38 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Hsp90aa1, Hsp90a, Hspc1, Hspca Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21de3 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet29a
symmetry	Space Group: P 1 21 1	R_factor 0.194 R_Free 0.196
crystal cell	length a length b length c angle alpha angle beta angle gamma 48.721 42.462 54.333 90.00 102.22 90.00
method	X-Ray Diffraction	resolution	1.60 Å
ligand	CXZ BindingDB	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Discovery of benzisoxazoles as potent inhibitors of chaperone heat shock protein 90., Gopalsamy A, Shi M, Golas J, Vogan E, Jacob J, Johnson M, Lee F, Nilakantan R, Petersen R, Svenson K, Chopra R, Tam MS, Wen Y, Ellingboe J, Arndt K, Boschelli F, J Med Chem. 2008 Feb 14;51(3):373-5. Epub 2008 Jan 16. PMID:18197612

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (43 Kb) [Save to disk] Biological Unit Coordinates (3bmy.pdb1.gz) 38 Kb LPC: Ligand-Protein Contacts for 3BMY CSU: Contacts of Structural Units for 3BMY Likely Quarternary Molecular Structure file(s) for 3BMY Structure Factors (474 Kb) Retrieve 3BMY in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3BMY from S2C, [Save to disk] Re-refined 3bmy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3BMY in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3BMY

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3BMY, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3bmy_A] [3bmy] SWISS-PROT database: [P07900] Domain organization of [HS90A_HUMAN] by SWISSPFAM Domain found in 3BMY: [HATPase_c ] by SMART

Other resources with information on 3BMY

Community annotation for 3BMY at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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