3BO5 Transferase date Dec 17, 2007
title Crystal Structure Of Methyltransferase Domain Of Human Histo N-Methyltransferase Setmar
authors V.V.Lunin, H.Wu, H.Ren, E.Dobrovetsky, J.Weigelt, C.H.Arrowsmith, A.M.Edwards, A.Bochkarev, J.Min, A.N.Plotnikov, Structural Geno Consortium (Sgc)
compound source
Molecule: Histone-Lysine N-Methyltransferase Setmar
Chain: A
Fragment: Histone-Lysine N-Methyltransferase Domain: Residu
Synonym: Set Domain And Mariner Transposase Fusion Gene-Con
Protein, Metnase, Hsmar1 [Includes: Histone-Lysine N- Methyltransferase, And Mariner Transposase Hsmar1];
Ec: 2.1.1.43
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Setmar
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Dh5a
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P15b
symmetry Space Group: P 1 21 1
R_factor 0.155 R_Free 0.199
crystal
cell
length a length b length c angle alpha angle beta angle gamma
41.396 67.827 44.637 90.00 105.93 90.00
method X-Ray Diffractionresolution 1.59 Å
ligand GOL, SAH, ZN enzyme Transferase E.C.2.1.1.43 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (55 Kb) [Save to disk]
  • Biological Unit Coordinates (3bo5.pdb1.gz) 50 Kb
  • LPC: Ligand-Protein Contacts for 3BO5
  • CSU: Contacts of Structural Units for 3BO5
  • Likely Quarternary Molecular Structure file(s) for 3BO5
  • Structure Factors (220 Kb)
  • Retrieve 3BO5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3BO5 from S2C, [Save to disk]
  • Re-refined 3bo5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3BO5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3BO5
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3BO5, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3bo5_A] [3bo5]
  • SWISS-PROT database: [Q53H47]
  • Domain organization of [SETMR_HUMAN] by SWISSPFAM
  • Domains found in 3BO5: [PostSET] [PreSET] [SET ] by SMART
  • Other resources with information on 3BO5
  • Community annotation for 3BO5 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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