3CE0	Transferase	date	Feb 27, 2008
title	Human Poly(Adp-Ribose) Polymerase 3, Catalytic Fragment In C With An Inhibitor Pj34
authors	L.Lehtio, T.Karlberg, C.H.Arrowsmith, H.Berglund, C.Bountra, R.Bu R.Collins, L.G.Dahlgren, A.M.Edwards, S.Flodin, A.Flores, S.Gras M.Hammarstrom, M.D.Herman, A.Johansson, I.Johansson, A.Kallas, T.Kotenyova, M.Moche, M.E.Nilsson, P.Nordlund, T.Nyman, C.Persso J.Sagemark, L.Svensson, A.G.Thorsell, L.Tresaugues, S.Van Den B M.Welin, J.Weigelt, Structural Genomics Consortium (Sgc)
compound		source
Molecule: Poly [Adp-Ribose] Polymerase 3 Chain: A Fragment: Catalytic Fragment: Residues 178-532 Synonym: Parp-3, Nad(+) Adp-Ribosyltransferase 3, Poly[Adp- Synthetase 3, Padprt-3, Hparp-3, Irt1; Ec: 2.4.2.30 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Parp3, Adprt3, Adprtl3 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pnic-Bsa4
symmetry	Space Group: P 1 21 1	R_factor 0.207 R_Free 0.263
crystal cell	length a length b length c angle alpha angle beta angle gamma 56.060 56.720 57.040 90.00 112.51 90.00
method	X-Ray Diffraction	resolution	2.80 Å
ligand	P34 BindingDB	enzyme	Transferase E.C.2.4.2.30 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Structural basis for inhibitor specificity in human poly(ADP-ribose) polymerase-3., Lehtio L, Jemth AS, Collins R, Loseva O, Johansson A, Markova N, Hammarstrom M, Flores A, Holmberg-Schiavone L, Weigelt J, Helleday T, Schuler H, Karlberg T, J Med Chem. 2009 May 14;52(9):3108-11. PMID:19354255

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (54 Kb) [Save to disk] Biological Unit Coordinates (3ce0.pdb1.gz) 50 Kb LPC: Ligand-Protein Contacts for 3CE0 CSU: Contacts of Structural Units for 3CE0 Likely Quarternary Molecular Structure file(s) for 3CE0 Structure Factors (64 Kb) Retrieve 3CE0 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3CE0 from S2C, [Save to disk] Re-refined 3ce0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3CE0 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3CE0

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3CE0, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3ce0_A] [3ce0] SWISS-PROT database: [Q9Y6F1] Domain organization of [PARP3_HUMAN] by SWISSPFAM

Other resources with information on 3CE0

Community annotation for 3CE0 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---