3CI9 Transcription date Mar 11, 2008
title Crystal Structure Of The Human Hsbp1
authors X.Liu, L.Xu, Y.Liu, G.Zhu, X.C.Zhang, X.Li, Z.Rao
compound source
Molecule: Heat Shock Factor-Binding Protein 1
Chain: A, B
Fragment: Unp Residues 6-53
Synonym: Nasopharyngeal Carcinoma- Associated Antigen 13, N
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Hsbp1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-28a-C(+)
symmetry Space Group: H 3
R_factor 0.195 R_Free 0.234
crystal
cell
length a length b length c angle alpha angle beta angle gamma
35.226 35.226 233.266 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.80 Å
note 3CI9 is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCrystal structure of the hexamer of human heat shock factor binding protein 1., Liu X, Xu L, Liu Y, Tong X, Zhu G, Zhang XC, Li X, Rao Z, Proteins. 2008 Sep 2. PMID:18767159
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (19 Kb) [Save to disk]
  • Biological Unit Coordinates (3ci9.pdb1.gz) 44 Kb
  • CSU: Contacts of Structural Units for 3CI9
  • Likely Quarternary Molecular Structure file(s) for 3CI9
  • Structure Factors (298 Kb)
  • Retrieve 3CI9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3CI9 from S2C, [Save to disk]
  • Re-refined 3ci9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3CI9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3CI9
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3CI9, from MSDmotif at EBI
  • Fold representative 3ci9 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ci9_A] [3ci9] [3ci9_B]
  • SWISS-PROT database: [O75506]
  • Domain organization of [HSBP1_HUMAN] by SWISSPFAM
  • Other resources with information on 3CI9
  • Community annotation for 3CI9 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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