3CJQ	Transferase Ribosomal Protein	date	Mar 13, 2008
title	Ribosomal Protein L11 Methyltransferase (Prma) In Complex Wi Dimethylated Ribosomal Protein L11 In Space Group P212121
authors	H.Demirci, S.T.Gregory, A.E.Dahlberg, G.Jogl
compound		source
Molecule: Ribosomal Protein L11 Methyltransferase Chain: A, D, G Synonym: L11 Mtase Ec: 2.1.1.- Engineered: Yes		Organism_scientific: Thermus Thermophilus Strain: Hb8 Gene: Prma Expression_system: Escherichia Coli Expression_system_strain: Bl21 (De3) Star Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet30b
Molecule: 50s Ribosomal Protein L11 Chain: B, E, H Engineered: Yes Mutation: Yes		Organism_scientific: Thermus Thermophilus Strain: Hb8 Gene: Rplk, Rpl11 Expression_system: Escherichia Coli Expression_system_strain: Bl21(De3) Prma::Tc Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet11a
symmetry	Space Group: P 21 21 21	R_factor 0.202 R_Free 0.271
crystal cell	length a length b length c angle alpha angle beta angle gamma 51.526 164.976 180.341 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.70 Å
ligand	2MM, IOD, SAH	enzyme	Transferase E.C.2.1.1 BRENDA
Gene Ontology	Chain Function Process Component A, D, G H, E, B
Primary reference	Multiple-Site Trimethylation of Ribosomal Protein L11 by the PrmA Methyltransferase., Demirci H, Gregory ST, Dahlberg AE, Jogl G, Structure. 2008 Jul;16(7):1059-66. PMID:18611379

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (184 Kb) [Save to disk] Biological Unit Coordinates (3cjq.pdb1.gz) 61 Kb Biological Unit Coordinates (3cjq.pdb2.gz) 60 Kb Biological Unit Coordinates (3cjq.pdb3.gz) 60 Kb LPC: Ligand-Protein Contacts for 3CJQ CSU: Contacts of Structural Units for 3CJQ Likely Quarternary Molecular Structure file(s) for 3CJQ Structure Factors (644 Kb) Retrieve 3CJQ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3CJQ from S2C, [Save to disk] Re-refined 3cjq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3CJQ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3CJQ

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3CJQ, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3cjq_D] [3cjq_E] [3cjq] [3cjq_B] [3cjq_H] [3cjq_A] [3cjq_G] SWISS-PROT database: [Q84BQ9] [P36238] Domain organization of [PRMA_THET8] [RL11_THETH] by SWISSPFAM Domain found in 3CJQ: [RL11 ] by SMART

Other resources with information on 3CJQ

Community annotation for 3CJQ at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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