3CMV Recombination date Mar 24, 2008
title Mechanism Of Homologous Recombination From The Reca-Ssdnads Structures
authors N.P.Pavletich
compound source
Molecule: Protein Reca
Chain: A, B, C, D, E, F, G, H
Synonym: Recombinase A
Engineered: Yes
 Organism_scientific: Escherichia Coli
symmetry Space Group: P 21 21 21
R_factor 0.243 R_Free 0.261
crystal
cell
length a length b length c angle alpha angle beta angle gamma
176.600 189.800 424.300 90.00 90.00 90.00
method X-Ray Diffractionresolution 4.30 Å
ligand ANP, MG enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, A, E, B, H, C, D, G


Primary referenceMechanism of homologous recombination from the RecA-ssDNA/dsDNA structures., Chen Z, Yang H, Pavletich NP, Nature. 2008 May 22;453(7194):489-4. PMID:18497818
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1437 Kb) [Save to disk]
  • Biological Unit Coordinates (3cmv.pdb1.gz) 196 Kb
  • Biological Unit Coordinates (3cmv.pdb2.gz) 192 Kb
  • Biological Unit Coordinates (3cmv.pdb3.gz) 194 Kb
  • Biological Unit Coordinates (3cmv.pdb4.gz) 194 Kb
  • Biological Unit Coordinates (3cmv.pdb5.gz) 192 Kb
  • Biological Unit Coordinates (3cmv.pdb6.gz) 194 Kb
  • Biological Unit Coordinates (3cmv.pdb7.gz) 192 Kb
  • Biological Unit Coordinates (3cmv.pdb8.gz) 193 Kb
  • LPC: Ligand-Protein Contacts for 3CMV
  • CSU: Contacts of Structural Units for 3CMV
  • Likely Quarternary Molecular Structure file(s) for 3CMV
  • Structure Factors (756 Kb)
  • Retrieve 3CMV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3CMV from S2C, [Save to disk]
  • Re-refined 3cmv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3CMV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3CMV
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3CMV, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3cmv_B] [3cmv_D] [3cmv_C] [3cmv_E] [3cmv_F] [3cmv] [3cmv_G] [3cmv_H] [3cmv_A]
  • SWISS-PROT database: [P0A7G6]
  • Domain organization of [RECA_ECOLI] by SWISSPFAM
  • Domain found in 3CMV: [AAA ] by SMART
    • Other resources with information on 3CMV
  • Community annotation for 3CMV at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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