3COM Transferase date Mar 28, 2008
title Crystal Structure Of Mst1 Kinase
authors S.Atwell, S.K.Burley, M.Dickey, B.Leon, J.M.Sauder, New York Sgx Center For Structural Genomics (Nysgxrc)
compound source
Molecule: Serinethreonine-Protein Kinase 4
Chain: A, B
Fragment: Protein Kinase Domain: Residues 2-311
Synonym: Ste20-Like Kinase Mst1, Mst-1, Mammalian Ste20-Lik Kinase 1, Serinethreonine-Protein Kinase Krs-2;
Ec: 2.7.11.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Stk4, Mst1
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Psgx4
symmetry Space Group: P 21 21 21
R_factor 0.208 R_Free 0.244
crystal
cell
length a length b length c angle alpha angle beta angle gamma
74.977 105.151 110.955 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand TPO enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (95 Kb) [Save to disk]
  • Biological Unit Coordinates (3com.pdb1.gz) 44 Kb
  • Biological Unit Coordinates (3com.pdb2.gz) 47 Kb
  • LPC: Ligand-Protein Contacts for 3COM
  • CSU: Contacts of Structural Units for 3COM
  • Likely Quarternary Molecular Structure file(s) for 3COM
  • Structure Factors (2097 Kb)
  • Retrieve 3COM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3COM from S2C, [Save to disk]
  • Re-refined 3com structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3COM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3COM
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3COM, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3com_A] [3com] [3com_B]
  • SWISS-PROT database: [Q13043]
  • Domain organization of [STK4_HUMAN] by SWISSPFAM
  • Domain found in 3COM: [S_TKc ] by SMART
  • Other resources with information on 3COM
  • Community annotation for 3COM at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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