3CW1 | Splicing | date | Apr 21, 2008 |
||||||||||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
title | Crystal Structure Of Human Spliceosomal U1 Snrnp | ||||||||||||||||||||||||||||||||||||||
authors | D.A.Pomeranz Krummel, C.Oubridge, A.K.Leung, J.Li, K.Nagai | ||||||||||||||||||||||||||||||||||||||
compound | source | ||||||||||||||||||||||||||||||||||||||
Molecule: U1 Snrna Chain: V, v, w, x Fragment: Nucleotides 57-82 Absent, Replaced With Kissing L Engineered: Yes Mutation: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Rnu1a Expression_system_vector_type: Linearized Plasmid Expression_system_plasmid: Puc Other_details: In Vitro Transcribed With T7 Rna Polymerase | ||||||||||||||||||||||||||||||||||||||
Molecule: Small Nuclear Ribonucleoprotein Sm D3 Chain: D, S, T, U Synonym: Sm-D3,Snrnp Core Protein D3 Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Snrpd3 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Sg13009(Prep4) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pqe30 Other_details: Coexpressed With Sm B, Entity 2 | ||||||||||||||||||||||||||||||||||||||
Molecule: Small Nuclear Ribonucleoprotein-Associated Protei B'; Chain: A, H, I, J Fragment: Residues 1-174 Synonym: Snrnp-B,Sm Protein Bb',Sm-Bb',Smbb' Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Snrpb, Cod, Snrpb1 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Sg13009(Prep4) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pqe30 Other_details: Coexpressed With Sm D3, Entity 1 | ||||||||||||||||||||||||||||||||||||||
Molecule: Small Nuclear Ribonucleoprotein Sm D1 Chain: B, M, N, O Synonym: Sm-D1,Sm-D Autoantigen,Snrnp Core Protein D1 Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Snrpd1 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3, Plyss) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet Other_details: Coexpressed With Sm D2, Entity 4 | ||||||||||||||||||||||||||||||||||||||
Molecule: Small Nuclear Ribonucleoprotein Sm D2 Chain: C, P, Q, R Synonym: Sm-D2,Snrnp Core Protein D2 Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Snrpd2, Snrpd1 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3, Plyss) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet Other_details: Coexpressed With Sm D1, Entity 3 | ||||||||||||||||||||||||||||||||||||||
Molecule: Small Nuclear Ribonucleoprotein F Chain: F, Z, 1, 2 Synonym: Snrnp-F,Sm Protein F,Sm-F,Smf Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Snrpf, Pbscf Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet15b Other_details: Coexpressed With Sm E And Sm G, Entities 6 A | ||||||||||||||||||||||||||||||||||||||
Molecule: Small Nuclear Ribonucleoprotein E Chain: E, W, X, Y Synonym: Snrnp-E,Sm Protein E,Sm-E,Sme Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Snrpe Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet15b Other_details: Coexpressed With Sm F And Sm G, Entities 5 A | ||||||||||||||||||||||||||||||||||||||
Molecule: Small Nuclear Ribonucleoprotein G Chain: G, 3, 4, 5 Synonym: Snrnp-G,Sm Protein G,Sm-G,Smg Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Snrpg, Pbscg Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet15b Other_details: Coexpressed With Sm F And Sm E, Entities 5 A | ||||||||||||||||||||||||||||||||||||||
Molecule: U1 Small Nuclear Ribonucleoprotein 70 Kda Chain: K, 6, 7, 8 Fragment: Residues 1-215 Synonym: U1 Snrnp 70 Kda,U1-70k,Snrnp70 Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Snrnp70, Rnpu1z, Rpu1, Snrp70, U1ap1 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet | ||||||||||||||||||||||||||||||||||||||
Molecule: U1 Small Nuclear Ribonucleoprotein C Chain: L, 9, 0, l Fragment: Residues 1-77 Synonym: U1 Snrnp C,U1-C,U1c Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Snrpc Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: B834(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet3b | ||||||||||||||||||||||||||||||||||||||
symmetry | Space Group: P 1 |
| |||||||||||||||||||||||||||||||||||||
crystal cell |
| ||||||||||||||||||||||||||||||||||||||
method | X-Ray Diffraction | resolution | 5.49 Å | ||||||||||||||||||||||||||||||||||||
ligand | ZN | enzyme |
| ||||||||||||||||||||||||||||||||||||
Gene Ontology |
| ||||||||||||||||||||||||||||||||||||||
Primary reference | Crystal structure of human spliceosomal U1 snRNP at 5.5 A resolution., Pomeranz Krummel DA, Oubridge C, Leung AK, Li J, Nagai K, Nature. 2009 Mar 26;458(7237):475-80. PMID:19325628 |
OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science |