3D00		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	CL, MSE, ZN	enzyme
Gene	SYNAS ; SYN ; YP
Gene Ontology	Chain Function Process Component A
Primary reference	Structures of three members of Pfam PF02663 (FmdE) implicated in microbial methanogenesis reveal a conserved alpha+beta core domain and an auxiliary C-terminal treble-clef zinc finger., Axelrod HL, Das D, Abdubek P, Astakhova T, Bakolitsa C, Carlton D, Chen C, Chiu HJ, Clayton T, Deller MC, Duan L, Ellrott K, Farr CL, Feuerhelm J, Grant JC, Grzechnik A, Han GW, Jaroszewski L, Jin KK, Klock HE, Knuth MW, Kozbial P, Krishna SS, Kumar A, Lam WW, Marciano D, McMullan D, Miller MD, Morse AT, Nigoghossian E, Nopakun A, Okach L, Puckett C, Reyes R, Sefcovic N, Tien HJ, Trame CB, van den Bedem H, Weekes D, Wooten T, Xu Q, Hodgson KO, Wooley J, Elsliger MA, Deacon AM, Godzik A, Lesley SA, Wilson IA, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2010 Oct 1;66(Pt, 10):1335-46. Epub 2010 Aug 4. PMID:20944230

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (36 Kb) [Save to disk] Biological Unit Coordinates (3d00.pdb1.gz) 58 Kb LPC: Ligand-Protein Contacts for 3D00 CSU: Contacts of Structural Units for 3D00 Likely Quarternary Molecular Structure file(s) for 3D00 Structure Factors (2543 Kb) Retrieve 3D00 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3D00 from S2C, [Save to disk] Re-refined 3d00 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3D00 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3d00] [3d00_A] SWISS-PROT database: [Q2LQ23]

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