3D0P		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	NA	enzyme
Gene Ontology	Chain Function Process Component A, C
Primary reference	Insights into RNA/DNA hybrid recognition and processing by RNase H from the crystal structure of a non-specific enzyme-dsDNA complex., Pallan PS, Egli M, Cell Cycle. 2008 Aug 15;7(16):2562-9. Epub 2008 Aug 18. PMID:18719385

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (61 Kb) [Save to disk] Biological Unit Coordinates (3d0p.pdb1.gz) 56 Kb Biological Unit Coordinates (3d0p.pdb2.gz) 56 Kb LPC: Ligand-Protein Contacts for 3D0P CSU: Contacts of Structural Units for 3D0P Likely Quarternary Molecular Structure file(s) for 3D0P Structure Factors (501 Kb) Retrieve 3D0P in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3D0P from S2C, [Save to disk] Re-refined 3d0p structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3D0P in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3d0p] [3d0p_A] [3d0p_B] [3d0p_C] [3d0p_D] SWISS-PROT database: [Q9KEI9]

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---