3D2U		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	BMA, FUC, MAN, NAG	enzyme
Gene Ontology	Chain Function Process Component B, F cellular response to iron io...
Primary reference	Structure of UL18, a peptide-binding viral MHC mimic, bound to a host inhibitory receptor., Yang Z, Bjorkman PJ, Proc Natl Acad Sci U S A. 2008 Jul 22;105(29):10095-100. Epub 2008 Jul 15. PMID:18632577

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (200 Kb) [Save to disk] Biological Unit Coordinates (3d2u.pdb1.gz) 98 Kb Biological Unit Coordinates (3d2u.pdb2.gz) 99 Kb LPC: Ligand-Protein Contacts for 3D2U CSU: Contacts of Structural Units for 3D2U Likely Quarternary Molecular Structure file(s) for 3D2U Structure Factors (1255 Kb) Retrieve 3D2U in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3D2U from S2C, [Save to disk] Re-refined 3d2u structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3D2U in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3d2u] [3d2u_A] [3d2u_B] [3d2u_C] [3d2u_D] [3d2u_E] [3d2u_F] [3d2u_G] [3d2u_H] SWISS-PROT database: [P60709] [P61769] [Q8NHL6] [P08560] Domains found in 3D2U: [IG] [IG_like] [IGc1 ] by SMART

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