3D4L date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 605, NA, NAG, NDG BindingDB enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • virus receptor activity
  • chemorepellent activity


    • Primary referenceDiscovery of new binding elements in DPP-4 inhibition and their applications in novel DPP-4 inhibitor design., Liang GB, Qian X, Biftu T, Singh S, Gao YD, Scapin G, Patel S, Leiting B, Patel R, Wu J, Zhang X, Thornberry NA, Weber AE, Bioorg Med Chem Lett. 2008 Jul 1;18(13):3706-10. Epub 2008 May 20. PMID:18524582
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (268 Kb) [Save to disk]
  • Biological Unit Coordinates (3d4l.pdb1.gz) 260 Kb
  • LPC: Ligand-Protein Contacts for 3D4L
  • CSU: Contacts of Structural Units for 3D4L
  • Likely Quarternary Molecular Structure file(s) for 3D4L
  • Structure Factors (1144 Kb)
  • Retrieve 3D4L in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3D4L from S2C, [Save to disk]
  • Re-refined 3d4l structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3D4L in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3d4l] [3d4l_A] [3d4l_B]
  • SWISS-PROT database: [P27487]

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science