3D5K		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	CL, NA, SCY	enzyme
Gene Ontology	Chain Function Process Component B, C, A xenobiotic transmembrane tra...
Primary reference	Structural and dynamical insights into the opening mechanism of P. aeruginosa OprM channel., Phan G, Benabdelhak H, Lascombe MB, Benas P, Rety S, Picard M, Ducruix A, Etchebest C, Broutin I, Structure. 2010 Mar 14;18(4):507-17. PMID:20399187

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (221 Kb) [Save to disk] Biological Unit Coordinates (3d5k.pdb1.gz) 215 Kb LPC: Ligand-Protein Contacts for 3D5K CSU: Contacts of Structural Units for 3D5K Likely Quarternary Molecular Structure file(s) for 3D5K Structure Factors (1066 Kb) Retrieve 3D5K in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3D5K from S2C, [Save to disk] Re-refined 3d5k structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3D5K in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3d5k] [3d5k_A] [3d5k_B] [3d5k_C] SWISS-PROT database: [Q51487] Belongs to the resistance-nodulation-cell division (rnd) superfamily according to TCDB.

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