3D9A		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
Gene Ontology	Chain Function Process Component C
Primary reference	Light chain somatic mutations change thermodynamics of binding and water coordination in the HyHEL-10 family of antibodies., Acchione M, Lipschultz CA, DeSantis ME, Shanmuganathan A, Li M, Wlodawer A, Tarasov S, Smith-Gill SJ, Mol Immunol. 2009 Dec;47(2-3):457-64. Epub 2009 Sep 24. PMID:19781789

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (104 Kb) [Save to disk] Biological Unit Coordinates (3d9a.pdb1.gz) 98 Kb CSU: Contacts of Structural Units for 3D9A Likely Quarternary Molecular Structure file(s) for 3D9A Structure Factors (1107 Kb) Retrieve 3D9A in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3D9A from S2C, [Save to disk] Re-refined 3d9a structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3D9A in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3d9a] [3d9a_C] [3d9a_H] [3d9a_L] SWISS-PROT database: [P01837] [P00698] Domains found in 3D9A: [IG_like] [IGv] [LYZ1 ] by SMART

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