3D9M date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand NH4, SEP, SO4 enzyme
Primary referenceSnapshots of the RNA processing factor SCAF8 bound to different phosphorylated forms of the carboxy-terminal domain of RNA-polymerase II., Becker R, Loll B, Meinhart A, J Biol Chem. 2008 Jun 11. PMID:18550522
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (58 Kb) [Save to disk]
  • Biological Unit Coordinates (3d9m.pdb1.gz) 27 Kb
  • Biological Unit Coordinates (3d9m.pdb2.gz) 26 Kb
  • LPC: Ligand-Protein Contacts for 3D9M
  • CSU: Contacts of Structural Units for 3D9M
  • Likely Quarternary Molecular Structure file(s) for 3D9M
  • Structure Factors (246 Kb)
  • Retrieve 3D9M in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3D9M from S2C, [Save to disk]
  • Re-refined 3d9m structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3D9M in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3d9m] [3d9m_A] [3d9m_B] [3d9m_Y] [3d9m_Z]
  • SWISS-PROT database: [Q9UPN6]
  • Domain found in 3D9M: [RPR ] by SMART

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