3DA9		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	44U, NA, PTR BindingDB	enzyme
Gene Ontology	Chain Function Process Component A B
Primary reference	Compounds binding to the S2-S3 pockets of thrombin., Nilsson M, Hamalainen M, Ivarsson M, Gottfries J, Xue Y, Hansson S, Isaksson R, Fex T, J Med Chem. 2009 May 14;52(9):2708-15. PMID:19371038

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (58 Kb) [Save to disk] Biological Unit Coordinates (3da9.pdb1.gz) 53 Kb LPC: Ligand-Protein Contacts for 3DA9 CSU: Contacts of Structural Units for 3DA9 Likely Quarternary Molecular Structure file(s) for 3DA9 Structure Factors (463 Kb) Retrieve 3DA9 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3DA9 from S2C, [Save to disk] Re-refined 3da9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3DA9 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3da9] [3da9_A] [3da9_B] [3da9_D] SWISS-PROT database: [P00734] Domain found in 3DA9: [Tryp_SPc ] by SMART

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