3DB6		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	FRS	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Structure of the Brachydanio rerio Polo-like kinase 1 (Plk1) catalytic domain in complex with an extended inhibitor targeting the adaptive pocket of the enzyme., Elling RA, Fucini RV, Hanan EJ, Barr KJ, Zhu J, Paulvannan K, Yang W, Romanowski MJ, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2008 Aug 1;64(Pt, 8):686-91. Epub 2008 Jul 26. PMID:18678933

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (53 Kb) [Save to disk] Biological Unit Coordinates (3db6.pdb1.gz) 47 Kb LPC: Ligand-Protein Contacts for 3DB6 CSU: Contacts of Structural Units for 3DB6 Likely Quarternary Molecular Structure file(s) for 3DB6 Structure Factors (79 Kb) Retrieve 3DB6 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3DB6 from S2C, [Save to disk] Re-refined 3db6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3DB6 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3db6] [3db6_A] SWISS-PROT database: [Q4KMI8] Domain found in 3DB6: [S_TKc ] by SMART

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---