3DBQ	Transferase	date	Jun 02, 2008
title	Crystal Structure Of Ttk Kinase Domain
authors	W.Wang, Y.T.Yang, Y.F.Gao, S.C.Zhu, F.Wang, W.Old, Q.B.Xu, K.Resing, N.Ahn, M.Lei, X.D.Liu
compound		source
Molecule: Dual Specificity Protein Kinase Ttk Chain: A Fragment: Ttk Protein Kinase, Residues 515-857 Synonym: Phosphotyrosine Picked Threonine-Protein Kinase, Pyt; Ec: 2.7.12.1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ttk, Mps1l1 Expression_system: Spodoptera Frugiperda Expression_system_common: Fall Armyworm Expression_system_taxid: 7108 Expression_system_strain: Sf9 Expression_system_vector_type: Baculovirus Expression_system_plasmid: Pfast-Bac-Gst
symmetry	Space Group: C 2 2 21	R_factor 0.226 R_Free 0.285
crystal cell	length a length b length c angle alpha angle beta angle gamma 105.847 106.427 70.682 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.70 Å
ligand		enzyme	Transferase E.C.2.7.12.1 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Structural and Mechanistic Insights into Mps1 Kinase Activation., Wang W, Yang Y, Gao Y, Xu Q, Wang F, Zhu S, Old W, Resing K, Ahn N, Lei M, Liu X, J Cell Mol Med. 2008 Dec 16. PMID:19120698

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (49 Kb) [Save to disk] Biological Unit Coordinates (3dbq.pdb1.gz) 45 Kb Biological Unit Coordinates (3dbq.pdb2.gz) 88 Kb CSU: Contacts of Structural Units for 3DBQ Likely Quarternary Molecular Structure file(s) for 3DBQ Structure Factors (101 Kb) Retrieve 3DBQ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3DBQ from S2C, [Save to disk] Re-refined 3dbq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3DBQ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3DBQ

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3DBQ, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3dbq] [3dbq_A] SWISS-PROT database: [P33981] Domain organization of [TTK_HUMAN] by SWISSPFAM Domain found in 3DBQ: [S_TKc ] by SMART

Other resources with information on 3DBQ

Community annotation for 3DBQ at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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