3DCZ CRYSTAL STRUCTURE OF A PUTATIVE RNFG SUBUNIT OF ELECTRON TRANSPORT COMPLEX (TM0246) FROM THERMOTOGA MARITIMA AT 1.65 A RESOLUTION date
authors JCSG, Joint.Center.for.Structural.Genomics.
compound source
symmetry
R_factor
R_Free 0.205
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.65
ligand ACT, EDO, MSE, SO4 enzyme
note 3DCZ is a representative structure
Gene TM
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (37 Kb) [Save to disk]
  • Biological Unit Coordinates (3dcz.pdb1.gz) 31 Kb
  • LPC: Ligand-Protein Contacts for 3DCZ
  • CSU: Contacts of Structural Units for 3DCZ
  • Likely Quarternary Molecular Structure file(s) for 3DCZ
  • Structure Factors (3302 Kb)
  • Retrieve 3DCZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3DCZ from S2C, [Save to disk]
  • Re-refined 3dcz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3DCZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3DCZ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3DCZ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3dcz] [3dcz_A]
  • SWISS-PROT database: [Q9WY88]
  • Domain organization of [Q9WY88_THEMA] by SWISSPFAM
  • Domain found in 3DCZ: [FMN_bind ] by SMART
  • Other resources with information on 3DCZ
  • Community annotation for 3DCZ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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