3DDY		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	RBF	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Structure of lumazine protein, an optical transponder of luminescent bacteria., Chatwell L, Illarionova V, Illarionov B, Eisenreich W, Huber R, Skerra A, Bacher A, Fischer M, J Mol Biol. 2008 Sep 26;382(1):44-55. Epub 2008 Jun 26. PMID:18602927

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (35 Kb) [Save to disk] Biological Unit Coordinates (3ddy.pdb1.gz) 30 Kb LPC: Ligand-Protein Contacts for 3DDY CSU: Contacts of Structural Units for 3DDY Likely Quarternary Molecular Structure file(s) for 3DDY Structure Factors (66 Kb) Retrieve 3DDY in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3DDY from S2C, [Save to disk] Re-refined 3ddy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3DDY in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3ddy] [3ddy_A] SWISS-PROT database: [Q06877]

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---