3DF0 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CA enzyme
note 3DF0 is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A
  • proteolysis

  • B


    Primary referenceConcerted multi-pronged attack by calpastatin to occlude the catalytic cleft of heterodimeric calpains., Moldoveanu T, Gehring K, Green DR, Nature. 2008 Nov 20;456(7220):404-8. PMID:19020622
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (154 Kb) [Save to disk]
  • Biological Unit Coordinates (3df0.pdb1.gz) 146 Kb
  • LPC: Ligand-Protein Contacts for 3DF0
  • CSU: Contacts of Structural Units for 3DF0
  • Likely Quarternary Molecular Structure file(s) for 3DF0
  • Structure Factors (538 Kb)
  • Retrieve 3DF0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3DF0 from S2C, [Save to disk]
  • Re-refined 3df0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3DF0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3df0] [3df0_] [3df0_A] [3df0_B] [3df0_C]
  • SWISS-PROT database: [Q07009] [Q64537] [P27321]
  • Domains found in 3DF0: [CysPc] [EFh] [calpain_III ] by SMART

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