3DIF date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Primary referenceA pipeline for the production of antibody fragments for structural studies using transient expression in HEK 293T cells., Nettleship JE, Ren J, Rahman N, Berrow NS, Hatherley D, Neil Barclay A, Owens RJ, Protein Expr Purif. 2008 Jul 10. PMID:18662785
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (142 Kb) [Save to disk]
  • Biological Unit Coordinates (3dif.pdb1.gz) 69 Kb
  • Biological Unit Coordinates (3dif.pdb2.gz) 71 Kb
  • CSU: Contacts of Structural Units for 3DIF
  • Likely Quarternary Molecular Structure file(s) for 3DIF
  • Structure Factors (274 Kb)
  • Retrieve 3DIF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3DIF from S2C, [Save to disk]
  • Re-refined 3dif structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3DIF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3dif] [3dif_A] [3dif_B] [3dif_C] [3dif_D]
  • SWISS-PROT database:
  • Domains found in 3DIF: [IG_like] [IGv ] by SMART

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