3DKY date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand MN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B, F, E, D, C


Primary referencePlasmid replication initiator RepB forms a hexamer reminiscent of ring helicases and has mobile nuclease domains., Boer DR, Ruiz-Maso JA, Lopez-Blanco JR, Blanco AG, Vives-Llacer M, Chacon P, Uson I, Gomis-Ruth FX, Espinosa M, Llorca O, del Solar G, Coll M, EMBO J. 2009 Jun 3;28(11):1666-78. PMID:19440202
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (411 Kb) [Save to disk]
  • Biological Unit Coordinates (3dky.pdb1.gz) 403 Kb
  • LPC: Ligand-Protein Contacts for 3DKY
  • CSU: Contacts of Structural Units for 3DKY
  • Likely Quarternary Molecular Structure file(s) for 3DKY
  • Structure Factors (333 Kb)
  • Retrieve 3DKY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3DKY from S2C, [Save to disk]
  • Re-refined 3dky structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3DKY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3dky] [3dky_A] [3dky_B] [3dky_C] [3dky_D] [3dky_E] [3dky_F]
  • SWISS-PROT database: [P13921]

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