3DL5 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CB3, DHF, NDP, UMP enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, E, A, D, C


Primary referenceExplaining an unusually fast parasitic enzyme: folate tail-binding residues dictate substrate positioning and catalysis in Cryptosporidium hominis thymidylate synthase., Martucci WE, Vargo MA, Anderson KS, Biochemistry. 2008 Aug 26;47(34):8902-11. Epub 2008 Aug 2. PMID:18672899
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (442 Kb) [Save to disk]
  • Biological Unit Coordinates (3dl5.pdb1.gz) 176 Kb
  • Biological Unit Coordinates (3dl5.pdb2.gz) 177 Kb
  • Biological Unit Coordinates (3dl5.pdb3.gz) 175 Kb
  • LPC: Ligand-Protein Contacts for 3DL5
  • CSU: Contacts of Structural Units for 3DL5
  • Likely Quarternary Molecular Structure file(s) for 3DL5
  • Structure Factors (1181 Kb)
  • Retrieve 3DL5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3DL5 from S2C, [Save to disk]
  • Re-refined 3dl5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3DL5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3dl5] [3dl5_A] [3dl5_B] [3dl5_C] [3dl5_D] [3dl5_E]
  • SWISS-PROT database: [Q5CGA3]

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