3DLL date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand MG, ZLD, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
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A


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C


D


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H


I


J


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M


N


O


P


Q


R


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V


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Y


Primary referenceThe oxazolidinone antibiotics perturb the ribosomal peptidyl-transferase center and effect tRNA positioning., Wilson DN, Schluenzen F, Harms JM, Starosta AL, Connell SR, Fucini P, Proc Natl Acad Sci U S A. 2008 Sep 9;105(36):13339-44. Epub 2008 Aug 29. PMID:18757750
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1625 Kb) [Save to disk]
  • Biological Unit Coordinates (3dll.pdb1.gz) 1614 Kb
  • LPC: Ligand-Protein Contacts for 3DLL
  • CSU: Contacts of Structural Units for 3DLL
  • Likely Quarternary Molecular Structure file(s) for 3DLL
  • Structure Factors (3121 Kb)
  • Retrieve 3DLL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3DLL from S2C, [Save to disk]
  • Re-refined 3dll structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3DLL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3dll] [3dll_1] [3dll_2] [3dll_3] [3dll_4] [3dll_A] [3dll_B] [3dll_C] [3dll_D] [3dll_E] [3dll_F] [3dll_G] [3dll_H] [3dll_I] [3dll_J] [3dll_K] [3dll_L] [3dll_M] [3dll_N] [3dll_O] [3dll_P] [3dll_Q] [3dll_R] [3dll_S] [3dll_T] [3dll_U] [3dll_V] [3dll_W] [3dll_X] [3dll_Y] [3dll_Z]
  • SWISS-PROT database: [Q9RSS7] [Q9RXY1] [Q9RXJ2] [Q9RSK9] [Q9RXJ5] [Q9RSJ5] [Q9RSL2] [Q9RWB4] [Q9RSW7] [Q9RY64] [Q9RXJ7] [Q9RXK0] [Q9RXJ1] [Q9RX88] [Q9RY65] [Q9RRG8] [Q9RXJ4] [Q9RXJ9] [Q9RSL0] [P49228] [Q9RSS4] [Q9RSH2] [Q9RSW6] [Q9RSK0] [Q9RXK2] [Q9RXK1] [Q9RXJ0] [Q9RSL3]
  • Domains found in 3DLL: [KOW] [RL11] [Ribosomal_L14] [Ribosomal_L2] [Ribosomal_L2_C ] by SMART

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