3DM3	Replication	date	Jun 30, 2008
title	Crystal Structure Of A Domain Of A Replication Factor A Prot Methanocaldococcus Jannaschii. Northeast Structural Genomic Mjr118e
authors	J.Seetharaman, M.Su, M.Maglaqui, H.Janjua, C.Ciccosanti, R.Xiao, R J.K.Everett, T.B.Acton, B.Rost, G.T.Montelione, L.Tong, J.F.Hunt Northeast Structural Genomics Consortium (Nesg)
compound		source
Molecule: Replication Factor A Chain: A, B, C Fragment: Residues 170-274 Synonym: Rp-A, Rf-A, Replication Factor A Protein 1, Single Dna-Binding Protein, Mjassb; Engineered: Yes		Organism_scientific: Methanocaldococcus Jannaschii Organism_common: Methanococcus Jannaschii Organism_taxid: 2190 Gene: Rpa, Mj1159 Expression_system: Escherichia Coli Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet 21
symmetry	Space Group: P 65 2 2	R_factor 0.225 R_Free 0.274
crystal cell	length a length b length c angle alpha angle beta angle gamma 76.001 76.001 249.479 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.40 Å
ligand	NA	enzyme
Gene Ontology	Chain Function Process Component A, C, B

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (54 Kb) [Save to disk] Biological Unit Coordinates (3dm3.pdb1.gz) 66 Kb Biological Unit Coordinates (3dm3.pdb2.gz) 50 Kb LPC: Ligand-Protein Contacts for 3DM3 CSU: Contacts of Structural Units for 3DM3 Likely Quarternary Molecular Structure file(s) for 3DM3 Structure Factors (245 Kb) Retrieve 3DM3 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3DM3 from S2C, [Save to disk] Re-refined 3dm3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3DM3 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3DM3

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3DM3, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3dm3_B] [3dm3_C] [3dm3_A] [3dm3] SWISS-PROT database: [Q58559] Domain organization of [RPA_METJA] by SWISSPFAM

Other resources with information on 3DM3

Community annotation for 3DM3 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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