3DMX		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	BNZ, CL, HED, PO4 BindingDB	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Halogenated benzenes bound within a non-polar cavity in T4 lysozyme provide examples of I...S and I...Se halogen-bonding., Liu L, Baase WA, Matthews BW, J Mol Biol. 2009 Jan 16;385(2):595-605. Epub 2008 Nov 6. PMID:19014950

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (37 Kb) [Save to disk] Biological Unit Coordinates (3dmx.pdb1.gz) 32 Kb LPC: Ligand-Protein Contacts for 3DMX CSU: Contacts of Structural Units for 3DMX Likely Quarternary Molecular Structure file(s) for 3DMX Structure Factors (137 Kb) Retrieve 3DMX in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3DMX from S2C, [Save to disk] Re-refined 3dmx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3DMX in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3dmx] [3dmx_A] SWISS-PROT database: [P00720]

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