3DND		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	LL2, SEP, TPO	enzyme
Gene Ontology	Chain Function Process Component A I
Primary reference	Crystallography-independent determination of ligand binding modes., Orts J, Tuma J, Reese M, Grimm SK, Monecke P, Bartoschek S, Schiffer A, Wendt KU, Griesinger C, Carlomagno T, Angew Chem Int Ed Engl. 2008;47(40):7736-40. PMID:18767090

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (69 Kb) [Save to disk] Biological Unit Coordinates (3dnd.pdb1.gz) 64 Kb LPC: Ligand-Protein Contacts for 3DND CSU: Contacts of Structural Units for 3DND Likely Quarternary Molecular Structure file(s) for 3DND Structure Factors (326 Kb) Retrieve 3DND in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3DND from S2C, [Save to disk] Re-refined 3dnd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3DND in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3dnd] [3dnd_A] [3dnd_I] SWISS-PROT database: [P61926] [P00517] Domains found in 3DND: [S_TK_X] [S_TKc ] by SMART

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