3DP5 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand HEC, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • electron transfer activity


    • Primary referenceCrystal packing of the c(6)-type cytochrome OmcF from Geobacter sulfurreducens is mediated by an N-terminal Strep-tag II., Lukat P, Hoffmann M, Einsle O, Acta Crystallogr D Biol Crystallogr. 2008 Sep;64(Pt 9):919-26. Epub 2008, Aug 13. PMID:18703839
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (24 Kb) [Save to disk]
  • Biological Unit Coordinates (3dp5.pdb1.gz) 19 Kb
  • LPC: Ligand-Protein Contacts for 3DP5
  • CSU: Contacts of Structural Units for 3DP5
  • Likely Quarternary Molecular Structure file(s) for 3DP5
  • Structure Factors (114 Kb)
  • Retrieve 3DP5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3DP5 from S2C, [Save to disk]
  • Re-refined 3dp5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3DP5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3dp5] [3dp5_A]
  • SWISS-PROT database: [Q74AE4]
  • Belongs to the geobacter nanowire electron transfer (g-net) family according to TCDB.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science