3DP9		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	BIG, IOD	enzyme
Gene Ontology	Chain Function Process Component C, A
Primary reference	Transition state analogs of 5'-methylthioadenosine nucleosidase disrupt quorum sensing., Gutierrez JA, Crowder T, Rinaldo-Matthis A, Ho MC, Almo SC, Schramm VL, Nat Chem Biol. 2009 Apr;5(4):251-7. Epub 2009 Mar 8. PMID:19270684

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (75 Kb) [Save to disk] Biological Unit Coordinates (3dp9.pdb1.gz) 70 Kb LPC: Ligand-Protein Contacts for 3DP9 CSU: Contacts of Structural Units for 3DP9 Likely Quarternary Molecular Structure file(s) for 3DP9 Structure Factors (295 Kb) Retrieve 3DP9 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3DP9 from S2C, [Save to disk] Re-refined 3dp9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3DP9 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3dp9] [3dp9_A] [3dp9_C] SWISS-PROT database: [Q9KPI8]

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---