3DRT date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand GOL enzyme
Primary referenceStructural constraints imposed by the conserved fusion peptide on the HIV-1 gp41 epitope recognized by the broadly neutralizing antibody 2F5., de la Arada I, Julien JP, de la Torre BG, Huarte N, Andreu D, Pai EF, Arrondo JL, Nieva JL, J Phys Chem B. 2009 Oct 15;113(41):13626-37. PMID:19754136
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (71 Kb) [Save to disk]
  • Biological Unit Coordinates (3drt.pdb1.gz) 66 Kb
  • LPC: Ligand-Protein Contacts for 3DRT
  • CSU: Contacts of Structural Units for 3DRT
  • Likely Quarternary Molecular Structure file(s) for 3DRT
  • Structure Factors (79 Kb)
  • Retrieve 3DRT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3DRT from S2C, [Save to disk]
  • Re-refined 3drt structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3DRT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3drt] [3drt_A] [3drt_B] [3drt_C]
  • SWISS-PROT database:
  • Domains found in 3DRT: [IG_like] [IGv ] by SMART

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