3DUY		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	AFJ BindingDB	enzyme
Gene Ontology	Chain Function Process Component C, B, A
Primary reference	Structure-based design and synthesis of macrocyclic peptidomimetic beta-secretase (BACE-1) inhibitors., Machauer R, Veenstra S, Rondeau JM, Tintelnot-Blomley M, Betschart C, Neumann U, Paganetti P, Bioorg Med Chem Lett. 2009 Mar 1;19(5):1361-5. Epub 2009 Jan 19. PMID:19195886

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (197 Kb) [Save to disk] Biological Unit Coordinates (3duy.pdb1.gz) 67 Kb Biological Unit Coordinates (3duy.pdb2.gz) 66 Kb Biological Unit Coordinates (3duy.pdb3.gz) 68 Kb LPC: Ligand-Protein Contacts for 3DUY CSU: Contacts of Structural Units for 3DUY Likely Quarternary Molecular Structure file(s) for 3DUY Structure Factors (1029 Kb) Retrieve 3DUY in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3DUY from S2C, [Save to disk] Re-refined 3duy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3DUY in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3duy] [3duy_A] [3duy_B] [3duy_C] SWISS-PROT database: [P56817] Belongs to the β-amyloid cleaving enzyme (bace1) family according to TCDB.

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